Summary
Dave Lunt researches the fundamental evolutionary processes causing genomes to differ between individuals, species, and across the diversity of life. He also investigates the application of modern approaches in genomics and bioinformatics to agriculture, medicine, and conservation.
He is a member of the EvoHull: Evolutionary and Environmental Genomics research group, and he applies genome sequencing to a range of both fundamental and applied problems.
His main research site can be found at http://davelunt.net/
Dave is a strong advocate for open and reproducible science.
Journal Article
Phased chromosome-scale genome assembly of an asexual, allopolyploid root-knot nematode reveals complex subgenomic structure
Winter, M. R., Taranto, A. P., Yimer, H. Z., Coomer Blundell, A., Siddique, S., Williamson, V. M., & Lunt, D. H. (2024). Phased chromosome-scale genome assembly of an asexual, allopolyploid root-knot nematode reveals complex subgenomic structure. PLoS ONE, 19(6), Article e0302506. https://doi.org/10.1371/journal.pone.0302506
Identification of individual root-knot nematodes using low coverage long-read sequencing
Sellers, G. S., Jeffares, D. C., Lawson, B., Prior, T., & Lunt, D. H. (2021). Identification of individual root-knot nematodes using low coverage long-read sequencing. PLoS ONE, 16(12), Article e0253248. https://doi.org/10.1371/journal.pone.0253248
The Genomic Substrate for Adaptive Radiation: Copy Number Variation across 12 Tribes of African Cichlid Species
Faber-Hammond, J. J., Renn, S. C., Venkatesh, B., Faber-Hammond, J. J., Bezault, E., Lunt, D. H., …Renn, S. C. P. (2019). The Genomic Substrate for Adaptive Radiation: Copy Number Variation across 12 Tribes of African Cichlid Species. Genome Biology and Evolution, 11(10), 2856-2874. https://doi.org/10.1093/gbe/evz185
Climate-warming alters the structure of farmland tri-trophic ecological networks and reduces crop yield
Derocles, S. A., Lunt, D. H., Berthe, S. C., Nichols, P. C., Moss, E. D., & Evans, D. M. (2018). Climate-warming alters the structure of farmland tri-trophic ecological networks and reduces crop yield. Molecular ecology, 27(23), 4931-4946. https://doi.org/10.1111/mec.14903
Working Paper